released on 4th October, 2005
Scarna HP ¡§ http://www.scarna.org/
Stem Candidate Aligner for RNA (Scarna) is a tool for sequence analyses of RNAs.
It aligns two RNA sequences and calculate the similarities of them, based on the estimated common secondary structures.
Scarna is a fast, convenient tool for clustering RNA sequences and for similarity search in long sequences.